Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2387 158 9e-34 seq8454 156 3e-33 seq6152 154 1e-32 seq70 149 5e-31 seq990 140 2e-28 seq5997 132 3e-26 >seq2387 Length=3272 Score = 158 bits (174), Expect = 9e-34 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || | ||| | || ||||||||| ||||| |||||||||||||||||| || Sbjct 335 ATACCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCC 276 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 ||||| ||| | || ||||||||||| ||||| ||||||| |||||||| || | Sbjct 275 GCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGC 216 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| |||||| ||||| |||| | || |||||| | || Sbjct 215 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCTC 157 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || |||||||| || || || |||||||||||||| ||||| Sbjct 156 CACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 106 >seq8454 Length=528 Score = 156 bits (172), Expect = 3e-33 Identities = 176/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||||||| ||||| |||||| ||||||||||| || Sbjct 304 CATGCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 245 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| ||||| ||||||| |||||||| || | Sbjct 244 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGG 185 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| |||||| ||||| |||| | || |||||| | | Sbjct 184 CGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCT 126 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||||| || |||||||| || || || |||||||||||||| |||||| Sbjct 125 CCACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 73 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||||||||| ||||| |||||| ||||||||||| || ||| Sbjct 528 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 469 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| ||||| ||||||| |||||||| || | || Sbjct 468 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 409 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| |||||| ||||| |||| | || |||||| | ||||| Sbjct 408 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCTCCAC 350 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || |||||||| || || || |||||||||||||| |||||| Sbjct 349 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 301 >seq6152 Length=1087 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||||||||| ||||| |||||| ||||||||||| || ||| Sbjct 251 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 192 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| ||||| ||||||| |||||||| || | || Sbjct 191 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 132 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| |||||| ||||| |||| | || |||||| | ||||| Sbjct 131 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCTCCAC 73 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || |||||||| || || || |||||||||||||| |||||| Sbjct 72 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 24 Score = 154 bits (170), Expect = 1e-32 Identities = 175/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||||||| ||||| |||||| ||||||||||| || Sbjct 1046 CATGCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 987 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| ||||| ||||||| |||||||| || | Sbjct 986 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGG 927 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| |||||| ||||| |||| | || |||||| | | Sbjct 926 CGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCT 868 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || |||||||| || || || |||||||||||||| ||||| Sbjct 867 CCACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 816 >seq70 Length=16190 Score = 149 bits (164), Expect = 5e-31 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||||||| ||||| |||||| ||||||||||| || ||||| ||| | || Sbjct 16186 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTC 16127 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| ||||| ||||||| |||||||| || | || | || ||||| || Sbjct 16126 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 16067 Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 | |||||| ||||| |||| | || |||||| | |||||||||| || |||| Sbjct 16066 CTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATCG 16008 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || || |||||||||||||| ||||| Sbjct 16007 TCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 15974 >seq990 Length=6061 Score = 140 bits (154), Expect = 2e-28 Identities = 173/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| ||||| |||||| ||||||||||| || ||| Sbjct 716 CCGCCGCGCAGGCGCAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 657 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| ||| | || ||||||||||| ||||| ||||||| |||||||| || | || Sbjct 656 AGTGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 597 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| |||||| ||||| |||| | || |||||| | || || Sbjct 596 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCTCGAC 538 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTG 44343 ||| | | |||||||| || || || |||||||||||||| ||||| |||| Sbjct 537 CTCGAGGGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATCTTGTG 484 >seq5997 Length=1133 Score = 132 bits (146), Expect = 3e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| ||||| ||||| |||||| ||||||||||| || ||||| ||| | || Sbjct 580 CAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTC 521 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| ||||| ||||||| |||||||| || | || | || ||||| || Sbjct 520 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 461 Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 | |||||| ||||| |||| | || |||||| | || ||||| | | |||| Sbjct 460 CTGGATCTTCGCCTTCAC-GTTCTCGATCGTGTCGCTCGCCTCGACCTCGAGGGCGATCG 402 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTG 44343 |||| || || || |||||||||||||| ||||| |||| Sbjct 401 TCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATCTTGTG 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359952554434242