Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7154 123 3e-23 >seq7154 Length=3127 Score = 123 bits (136), Expect = 3e-23 Identities = 279/413 (68%), Gaps = 16/413 (4%) Strand=Plus/Minus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 ||||| ||||| ||| ||| ||||| ||||| || ||| ||| | || || || ||| Sbjct 2513 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGGC 2454 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 || ||||| | |||| | | ||||| |||| |||| ||| |||||||| Sbjct 2453 CGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAC 2394 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 || || || || |||||||| | ||||||||||| ||| ||| || || ||||| Sbjct 2393 GGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCATTG 2334 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 |||||| ||||| || |||||||| || || |||||||| ||||| | | Sbjct 2333 CTCACGTAAAACTGTGCGAGCAGGTGGCACGGTGGTAGGGCCATCCTGGGCAAAGCGCTC 2274 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGC--TC-TCGGGGTTCCTCTTGA---TCTCC 145980 || ||||| || || || |||| ||| || || || || ||| |||| | | || Sbjct 2273 GGATTCCATGCCGT---GAAGAGCATCCGGCGATCGTCAGGATTCGTCTTTAGTGTTTCA 2217 Query 145981 CCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTG--TCTTGGAGTCCA 146038 | || || ||| || ||||| ||||| || || | | || ||| || Sbjct 2216 ACGAT---TGCCTTGATTTGATCCACCCCCTGTCCGTCATAGTTGGCATCATGGTGT--G 2162 Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC 146091 ||| ||||| || ||||| | |||||| || |||||||| || || |||||| Sbjct 2161 TGTAGGCGGCACCAAAGTGACGCCACTGAAAGCCGTAGACAGGACCGAGGTCC 2109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589877508936760