Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq10818 95.1 8e-15 seq5117 95.1 8e-15 seq4397 95.1 8e-15 seq4197 95.1 8e-15 >seq10818 Length=512 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||| |||| |||||||||||||||| | ||| || |||||| | Sbjct 285 AAGTCCGTTCCCTTGACTGTCGTTTCGCTAGATAGTAACTCGGGACAGAGGGAATCTCAT 344 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||| |||||| || ||||| Sbjct 345 TAATCCATTCATGCGCGTCTCTAATTGGAAGACGA 379 >seq5117 Length=564 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||| |||| |||||||||||||||| | ||| || |||||| | Sbjct 288 AAGTCCGTTCCCTTGACTGTCGTTTCGCTAGATAGTAACTCGGGACAGAGGGAATCTCAT 347 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||| |||||| || ||||| Sbjct 348 TAATCCATTCATGCGCGTCTCTAATTGGAAGACGA 382 >seq4397 Length=576 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||| |||| |||||||||||||||| | ||| || |||||| | Sbjct 332 AAGTCCGTTCCCTTGACTGTCGTTTCGCTAGATAGTAACTCGGGACAGAGGGAATCTCAT 273 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||| |||||| || ||||| Sbjct 272 TAATCCATTCATGCGCGTCTCTAATTGGAAGACGA 238 >seq4197 Length=578 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||| |||| |||||||||||||||| | ||| || |||||| | Sbjct 334 AAGTCCGTTCCCTTGACTGTCGTTTCGCTAGATAGTAACTCGGGACAGAGGGAATCTCAT 275 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||| |||||| || ||||| Sbjct 274 TAATCCATTCATGCGCGTCTCTAATTGGAAGACGA 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334836903875789