Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq15897 100 2e-16 seq3911 98.7 7e-16 seq18697 91.5 1e-13 >seq15897 Length=564 Score = 100 bits (110), Expect = 2e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| || | || || | ||| | || || ||| ||| || || |||||||| || | Sbjct 160 CACCGCCGCGCAGGCGCAGCACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCTG 219 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 ||| ||||| |||| |||| || || || || || |||| |||||||| || ||| Sbjct 220 CGAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCG 279 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCC 33699 | | || || ||||| || ||| |||| | | ||| ||||||||| |||||| Sbjct 280 GAATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTCTCAATGGTGTCGCTGGATTCC 338 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 || || | || |||||| || || || | || || || ||||||||||| ||| Sbjct 339 ACCTCGAGCGCGATCGTCTTGCCCGTCAGTGTCTTCACGAAGATCTGCATGGTT 392 >seq3911 Length=608 Score = 98.7 bits (108), Expect = 7e-16 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || | ||| ||||| |||| |||| || Sbjct 554 TGCAGCGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGCGTGCGGCCGTCCTCCAGCTGC 495 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || |||| |||||||| || |||| | || || ||||| || ||| Sbjct 494 TTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTC 435 Query 33667 TGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| | | ||| ||||||||| |||||||| || | || |||||| || || || Sbjct 434 GCCTTCA-CGTTCTCAATGGTGTCGCTGGATTCCACCTCGAGCGCGATCGTCTTGCCCGT 376 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTT 33753 | || || || ||||||||||| ||| Sbjct 375 CAGTGTCTTCACGAAGATCTGCATGGTT 348 >seq18697 Length=8154 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | ||| | || || ||| ||| || || |||||||| || | | Sbjct 7654 CCACCGCGCAGGCGCAGCACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCTGCG 7595 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || || || |||| |||||||| || |||| Sbjct 7594 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGTTCCGGCGGA 7535 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || ||| |||| | | ||| ||||||||| || ||||| Sbjct 7534 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CTTTCTCAATGGTGTCGCTGGACTCCAC 7476 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || |||||| || || || | || || | |||||||||||| Sbjct 7475 TTCGAGCGCGATCGTCTTGCCCGTCAGTGTCTTCGCGAAGATCTGCATA 7427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328595759724480