Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq12610 127 3e-24 >seq12610 Length=6403 Score = 127 bits (140), Expect = 3e-24 Identities = 291/438 (66%), Gaps = 0/438 (0%) Strand=Plus/Minus Query 69591 CTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCT 69650 ||| || |||| ||| ||||| || |||||||||||||| ||| | ||||| | || Sbjct 2815 CTTCACACGTTCCATGAATAGGTCAGGAATCCAAAGAGCGTAAAACAAATCTCGTGCCCT 2756 Query 69651 ATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCA 69710 || ||||| || || |||||||| || | | ||||| | | |||||| |||||| Sbjct 2755 ATGGTCTTCCTTACCCGTATTTTTCTTCAAAAGAAGAAAATTAAATATATCACCATGCCA 2696 Query 69711 TGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCT 69770 || |||| || || || | | | || || || || |||||||||| || | Sbjct 2695 AGGCTCTAAGTAAATGGCAAAGGCGCCTTTACGCTTTCCACCCCCCTGATCTACATAGCG 2636 Query 69771 GGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCC 69830 || |||||||| | || | |||||||| | || || || || | |||||||| || Sbjct 2635 AGCCGTGTTATTCCAAACACGTAGCATCGGTACAAGTCCGTTTGACTGGCCATTTGTCCC 2576 Query 69831 AGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCAT 69890 || ||| || || || ||| ||||| | | || || || || || Sbjct 2575 AGCAATGTAGCTCCCGGAACAGCGGATATTGTGCACGTGGACGCCAATGCCACCAGCTGA 2516 Query 69891 TTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTAT 69950 |||| || | || || | |||||||| ||||| || ||||| || || || || Sbjct 2515 TTTACTTATAACGGCGCATTGCTTCAATGTATCATAAATCCCCTCAATACTGTCCTCCCG 2456 Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 |||| || ||||||||| | ||||||| || ||||| ||||| |||||||| Sbjct 2455 CATGGCAACAAGAAAACAAGAACTCATTTGAGGAAAAGGTGTTCCGGCATTGAATAATGT 2396 Query 70011 AGGAGATGCGTGAGTGAA 70028 || | || || ||||| Sbjct 2395 CGGTGTGGCATGTGTGAA 2378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686676805139160