Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq12610 91.5 4e-13 >seq12610 Length=6403 Score = 91.5 bits (100), Expect = 4e-13 Identities = 188/277 (68%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 206448 CTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGA 206507 ||| || | ||| ||||| || ||||| | || | |||||| || | || || || || Sbjct 2650 CTGATCTACATAGCGAGCCGTGTTATTCCAAACACGTAGCATCGGTACAAGTCCGTTTGA 2591 Query 206508 AGTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAATCC 206567 |||||||| || ||| | || || | | | ||||| || | || | || Sbjct 2590 CTGGCCATTTGTCCCAGCAATGTAGCTCCCGGAACAGCGGATATTGTGCACGTGGACGCC 2531 Query 206568 AATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATC 206627 ||| || || || |||| ||| || |||| || ||||||| |||||| || || Sbjct 2530 AATGCCACCAGCTGATTTACTTATAACGGCGCATTGCTTCAATGTATCATAAATCCCCTC 2471 Query 206628 AACACTATCACTTTC-CATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTC 206686 || ||| || || | ||| |||| | |||||||||||| | ||| || || |||| Sbjct 2470 AATACTGTC-CTCCCGCATGGCAACAAGAAAACAAGAACTCATTTGAGGAAAAGGTGTTC 2412 Query 206687 CAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATA 206723 | ||||| ||||| || || || |||||||| || || Sbjct 2411 CGGCATTGAATAATGTCGGTGTGGCATGTGTGAAGTA 2375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514729847811257