Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000188675.2_202012-10-02] 27,019 sequences; 38,589,511 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7154 116 3e-21 >seq7154 Length=3127 Score = 116 bits (128), Expect = 3e-21 Identities = 163/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 29650 CGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGG 29709 ||| || ||||| | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 2514 CGGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGG 2455 Query 29710 TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAA 29769 ||||| || | | || || | | || | ||| | |||| ||| ||||| || Sbjct 2454 CCGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAA 2395 Query 29770 GGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTC 29829 || || || || |||||||| | ||| | |||||||||| ||| || || || || | Sbjct 2394 CGGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCATT 2335 Query 29830 GCTCACGTAAAACTGACACATGGCA--TGGCACGGAGGAAGGGCCAT 29874 ||||||||||||||| | ||| |||||||| || |||||||| Sbjct 2334 GCTCACGTAAAACTGTGCGA--GCAGGTGGCACGGTGGTAGGGCCAT 2290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406029452869834