Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq590 118 1e-21 seq614 89.7 6e-13 >seq590 Length=263001 Score = 118 bits (130), Expect = 1e-21 Identities = 275/410 (67%), Gaps = 10/410 (2%) Strand=Plus/Minus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 ||||| ||||| ||| ||| ||||| ||||| || ||| ||| | || || || ||| Sbjct 236155 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGGC 236096 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 || ||||| | |||| | | ||||| |||| |||| ||| |||||||| Sbjct 236095 CGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAC 236036 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 || || || || |||||||| | ||||||||||| ||| ||| || || ||||| Sbjct 236035 GGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCATTG 235976 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 |||||| ||||| || |||||||| || || |||||||| ||||| | | Sbjct 235975 CTCACGTAAAACTGTGCGAGCAGGTGGCACGGTGGTAGGGCCATCCTGGGCAAAGCGCTC 235916 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGC--TC-TCGGGGTTCCTCTTGATCTCCCCT 145983 || ||||| || || || ||| ||| || || || || || |||| | | | Sbjct 235915 GGATTCCATGCCGT---GAATAGCATCCGGCGATCGTCAGGATTTGTCTTTAGCGTTTCA 235859 Query 145984 ATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTG--TCTTGGAGTCCACGT 146041 | | || ||| || ||||| ||||| || || | | || ||| || || Sbjct 235858 ACGATTGCCTTGATTTGATCCACACCCTGTCCGTCATAGTTGGCATCATGGTGT--GTGT 235801 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC 146091 | ||||| || ||||| | |||||| || |||||||| || || |||||| Sbjct 235800 AGGCGGCACCAAAGTGACGCCACTGAAAGCCGTAGACAGGACCGAGGTCC 235751 >seq614 Length=348591 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 ||||| ||||| ||| ||| ||||| ||||| || ||| ||| | || || || ||| Sbjct 130233 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGGC 130292 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 || ||||| | |||| | | ||||| |||| |||| ||| |||||||| Sbjct 130293 CGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAT 130352 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 || || || || |||||||| | ||||||||||| ||| ||| || || ||||| Sbjct 130353 GGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGAAAGTTCCCCATTG 130412 Query 145867 GCCACGTAGAACTG 145880 |||||| ||||| Sbjct 130413 CTCACGTAAAACTG 130426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589859246059800