Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq590 102 2e-16 >seq590 Length=263001 Score = 102 bits (112), Expect = 2e-16 Identities = 408/623 (65%), Gaps = 22/623 (4%) Strand=Plus/Plus Query 35168 GGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCA 35227 || || || ||||| ||||| | || ||| | ||||| || || || | | ||| Sbjct 235521 GGCACGCTCTCCATCTTTGGCGCACAGATGCGTTTCTCGCTCCGCAACAATCGCCTACCA 235580 Query 35228 GTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTG-GAAGAACTCTCGTGGTTCAT 35286 || | || || ||| |||| ||| | || || ||| || ||||| |||||| | Sbjct 235581 CTTTTGACAACGAAGCGGGTTTTTTGGCGCGGTGT-GTGCGAGGAACTGCTGTGGTTTCT 235639 Query 35287 CAGGGGCAATACAGACGCCAAAGAATTG---GCCAAGAAGAAGATACACATCTGGAACGC 35343 ||||| | ||| | |||||| | || | |||| | || | ||||| ||| ||| Sbjct 235640 ACGGGGCGAAACATATGCCAAAAAGTTAAGTGACAAG--GGAG-TCCACATATGGGACGA 235696 Query 35344 TAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGA-TA-GAGCAGAGGGAGAT 35401 || || ||||| | ||| | |||||| | || | || || ||| ||| ||| | Sbjct 235697 CAACGGCTCGCGCGCGTTTCTTGACAGTCGTGGCCTCACAGAGTACGAGGAGATGGACCT 235756 Query 35402 TTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATG-ATACCTGTTC 35460 || || || ||||| || || |||||||| |||||||| | || | ||| | Sbjct 235757 C--GGTCCTGTCTACGGCTTTCAGTGGCGTCACTTTGGTGCCGCCTACACACACCA-TGA 235813 Query 35461 TTCCGATTATACTGGAAAGGGTATTGATCAATTG--GCCAATATACTAAAGACCCTGAGA 35518 | || | ||| ||| ||||| | |||||| | | |||| ||| | || | | Sbjct 235814 TGCCAACTATGACGGACAGGGTGTGGATCAAATCAAGGCAATCGTTGAAA--CGCTAA-A 235870 Query 35519 GA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCT 35577 || |||||| || ||| | ||||| | | |||||||||||||| | | | | | | Sbjct 235871 GACAAATCCTGACGATCGCCGGATGCTATTCACGGCATGGAATCCGAGCGCTTTGCCCAG 235930 Query 35578 TATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTC 35637 ||||| || || || |||||| || || || ||||| ||| ||||| ||| |||| Sbjct 235931 GATGGCCCTACCACCGTGCCACCTGCTCGCACAGTTTTACGTGAGCAATGGGGAACTGTC 235990 Query 35638 GTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATC 35697 ||| | | || ||||| | || | || | ||||| || ||||| ||||| || Sbjct 235991 TTGCATGCTCTACCAGCGCTCATGTGACATGGGCCTTGGCGTCCCGTTCAACATTGCCTC 236050 Query 35698 ATACTCTCTTCTGACTCAT-CTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTA 35756 ||| | || |||| ||| || || || | | ||| || ||||||||||| Sbjct 236051 CTACGCCCTCTTGAC-CATCCTCATCGCAAAGGCGACGGGGCTGCGGCCGGGAGAGTTGG 236109 Query 35757 TCCTCACTCTTGGTGACGCACAC 35779 | | ||| ||||||||||| ||| Sbjct 236110 TGCACACCCTTGGTGACGCTCAC 236132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989210031567725