Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq594 113 6e-20 >seq594 Length=267672 Score = 113 bits (124), Expect = 6e-20 Identities = 293/447 (66%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 66032 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 66091 ||||| || ||||| || | |||||| || | ||| || || |||||||||||||| Sbjct 92919 CATCAGCGTCCACTTGCCTCCGCTCTTCACACGCTCCATGAATAGGTCAGGAATCCAAAG 92978 Query 66092 AGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 66151 ||| ||| ||||||| | ||||| || || || || ||||| || || | | || Sbjct 92979 AGCGTAAAACAAATCTCGCGCCCTATGGTCTTCCTTACCCGTATTTTTCTTCAAAAGAAG 93038 Query 66152 GAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 66211 || | |||||| |||||| || || ||||| ||||| | | || || || Sbjct 93039 AAAATTAAATATATCACCATGCCAAGGCTCTAAGTAGATGGCAAAGGCGCCTTTACGCTT 93098 Query 66212 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 66271 | || |||||||||| || | || |||||||| |||| | | ||| || | || Sbjct 93099 GCCACCCCCCTGATCTACATAGCGCGCCGTGTTATTCCAAACACGTAGCATCGGTACAAG 93158 Query 66272 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT 66331 || || || ||||| ||||| | || ||||| || || ||||| | Sbjct 93159 TCCGTTTGACTGGCCATTTGTCCCAGCAATGTAGCTCCCGGAACAGCGGATATTGTGCAC 93218 Query 66332 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 66391 | || || || || || |||| || | |||||| | || || |||||||| Sbjct 93219 GTGGACGCCAATGCCACCAGCTGATTTACTTATAACGGCGCATTGCTTCAATGTATCATA 93278 Query 66392 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 66451 || ||||| ||||| || ||| |||| || |||||||| | |||||| || Sbjct 93279 AATCCCCTCAATACTGTCCTCCCGCATGGCAACAAGAAAACAAGAACTCATTTGAGGAAA 93338 Query 66452 ACTAGTTCCCGCATTAAATAAGGTAGG 66478 | ||||| ||||| ||||| || || Sbjct 93339 AGGCGTTCCGGCATTGAATAATGTCGG 93365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657930139915800