Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq590 138 1e-27 seq614 125 6e-24 >seq590 Length=263001 Score = 138 bits (152), Expect = 1e-27 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || || ||||| ||| |||| ||||| |||||||| | ||||||||| || |||||||| Sbjct 236155 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGGC 236096 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 ||| ||||| | | ||||| || |||| |||||||||| ||| ||||| ||| Sbjct 236095 CGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAC 236036 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 ||||| || ||||||||||| || | |||||| ||| ||| ||||| ||||| Sbjct 236035 GGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCATTG 235976 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCC 21153 |||||||||||| | | ||| || || || || ||||||| Sbjct 235975 CTCACGTAAAACTGTGCGAGCAGGTGGCACGGTGGTAGGGCCATCC 235930 >seq614 Length=348591 Score = 125 bits (138), Expect = 6e-24 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || || ||||| ||| |||| ||||| |||||||| | ||||||||| || |||||||| Sbjct 130233 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGGC 130292 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 ||| ||||| | | ||||| || |||| |||||||||| ||| ||||| || Sbjct 130293 CGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAT 130352 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 ||||| || ||||||||||| || | |||||| ||| ||| || || ||||| Sbjct 130353 GGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGAAAGTTCCCCATTG 130412 Query 21108 GCCACGTAAAACTG 21121 |||||||||||| Sbjct 130413 CTCACGTAAAACTG 130426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427622227227600