Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_003444.1 Length=37074 Score E Sequences producing significant alignments: (Bits) Value seq13611 425 1e-114 >seq13611 Length=919 Score = 425 bits (470), Expect = 1e-114 Identities = 357/437 (82%), Gaps = 6/437 (1%) Strand=Plus/Plus Query 35648 CAGCGTAAAGCTTTCCTGGATATGGTGGCATGGTCAGAAGGAACGGATAACGGGCGACAA 35707 || ||||| || || || |||||| |||| ||||| || ||||| |||||||| || || Sbjct 42 CAACGTAAGGCGTTTCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACGGACGTCAG 101 Query 35708 CCGACACGTAACCACGGTTATGATGTTATTGTTGGTGGCGAACTGTTCACTGATTACTCC 35767 || | || || |||||||| || ||||| || || || || || |||||||||||| Sbjct 102 AAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTGATTACTCC 161 Query 35768 GATCACCCTCGCAAACTTGTCACGCTAAACCCCAAACTCAAATCAACAGCCGCCGGACGT 35827 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 162 GATCACCCTCGCAAACTTGTCACGCTAAACCCAAAACTCAAATCAACAGGCGCCGGACGC 221 Query 35828 TACCAGCTTCTTTCACGCTGGTGGGATGCTTACCGTAAACAGCTTGGCCTGAAAGATTTT 35887 |||||||||||||| || ||||||||||| ||||| || ||||||||||||||||| || Sbjct 222 TACCAGCTTCTTTCCCGTTGGTGGGATGCCTACCGCAAGCAGCTTGGCCTGAAAGACTTC 281 Query 35888 TCTCCAGAAAGCCAGGACGCTGTAGCTCTGCAGCAGATTAAAGAGCGTGGTGCTTTACCG 35947 ||||| |||| ||||||||||| || ||||||||||||| |||||||| |||||||| Sbjct 282 TCTCCGAAAAGTCAGGACGCTGTGGCATTGCAGCAGATTAAGGAGCGTGGCGCTTTACCT 341 Query 35948 ATGATTGACCGCGGCAGTATTCGTCAGGCAATCGACCGTTGCAGCAATATCTGGGCGTCG 36007 |||||||| || || ||| ||||||||||||||||||||||||||||||||||| || Sbjct 342 ATGATTGATCGTGGTGATATCCGTCAGGCAATCGACCGTTGCAGCAATATCTGGGCTTCA 401 Query 36008 TTACCTGGTGCAGGTTACGGTCAGTATGAACATAAAATCGGTGA---CCTGATTGCCCGA 36064 | || || || ||||| ||||||| || ||||| | ||| ||||||||| | Sbjct 402 CTGCCGGGCGCTGGTTATGGTCAGTTCGAGCATAA---GGCTGACAGCCTGATTGCAAAA 458 Query 36065 TTTAAAAAAGCTGGTGG 36081 || ||| |||| || || Sbjct 459 TTCAAAGAAGCGGGCGG 475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118473689680840