Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq13611 123 7e-24 >seq13611 Length=919 Score = 123 bits (136), Expect = 7e-24 Identities = 192/274 (70%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 5779 AAGGCGTTTCTGGATATGCTGGCGTACAGCGAGGGTACGGATAACGGGCGGCAGAAAACC 5838 ||||||||||| ||||||||||||| ||||| || |||||||| || ||||||||| Sbjct 48 AAGGCGTTTCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACGGACGTCAGAAAACC 107 Query 5839 AATAATCATGGCTATGATGTGATTGTTGGTGGCTCGCTGTTTACTGACTACTCCGACCAT 5898 | |||||||| ||||| || ||||| || || ||| |||||||| |||||||| || Sbjct 108 AGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTGATTACTCCGATCAC 167 Query 5899 CCGCGCAAGCTGATCAGCCT---GCCAAAGCTGGGCATCAAATCCACTGCTGCCGGGCGC 5955 || ||||| || ||| || ||||| | ||||||| || | ||||| ||| Sbjct 168 CCTCGCAAACTTGTCACGCTAAACCCAAAAC------TCAAATCAACAGGCGCCGGACGC 221 Query 5956 TATCAGGTGCTGGCTAAGTTTTATGACGCGTACAAAAAACAACTGCGCCTGCCTGACTTC 6015 || ||| | || | | | || || ||| || || || ||||| |||||| Sbjct 222 TACCAGCTTCTTTCCCGTTGGTGGGATGCCTACCGCAAGCAGCTTGGCCTGAAAGACTTC 281 Query 6016 TCCCCAGCATCGCAGGACGCCATTGCAATGCAGC 6049 || || | |||||||| | ||| |||||| Sbjct 282 TCTCCGAAAAGTCAGGACGCTGTGGCATTGCAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143991148979470