Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq13611 277 5e-70 seq5240 138 3e-28 >seq13611 Length=919 Score = 277 bits (306), Expect = 5e-70 Identities = 210/248 (85%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 22084 ATGAGCAGATTAACCTCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 22143 ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 497 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 556 Query 22144 TGGGCTGTTAATCATTATCGTGATAACGCCATCACCTACAAAGTCCAGCGCGACACTGTT 22203 ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| | Sbjct 557 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 616 Query 22204 ACTCAAAAGCTGGCGCTGGCGAACGCGACAATTACCGATATGCAAACGCGCCAGCGTGAT 22263 | | | ||| ||||||||||||| ||||||| || ||||| | ||| ||||||||| Sbjct 617 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 676 Query 22264 GTAGCAGAACTTGACGCCAGATACACAAAGGAGCTTGCTGATGCGAAAGCTGAGAATGAT 22323 || || | || || || | |||||| |||||| | |||||||| |||||||| |||||| Sbjct 677 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGAT 736 Query 22324 GCTCTTCG 22331 ||||| || Sbjct 737 GCTCTGCG 744 >seq5240 Length=752 Score = 138 bits (152), Expect = 3e-28 Identities = 84/89 (94%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 5918 CCTACCGTAAGAGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTT 5977 ||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 CCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTT 693 Query 5978 CTTTCCCGTTCATCCAGTAGTGCCAGCAC 6006 ||||||||||||||||| ||| ||||||| Sbjct 692 CTTTCCCGTTCATCCAGCAGTTCCAGCAC 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134042634698570