Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq13611 80.6 8e-11 >seq13611 Length=919 Score = 80.6 bits (88), Expect = 8e-11 Identities = 169/249 (68%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 142 CAATCACAGCAATGCAGCAACAGCAGCATGACGTTGCAGCAATCGACGCTAAATACACGC 201 |||| || | |||||| | |||| ||| ||||| || |||| || ||||||||| Sbjct 645 CAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGA 704 Query 202 GAGAACTGAATGATGCGAAA-CAGACTATTACTGATTTGCAGCGTGACGTTGCCAGCGGT 260 || | |||||| ||| | || || | || | ||| ||| |||||| ||| Sbjct 705 AGGAGTTAGCTGATGCTAAAGCTGAAAATGA-TGCTCTGCGTGATGATGTTGCCGCTGGT 763 Query 261 GCTAAGCGGCTGCGGGTCAACGCAAAGTGTC---CAGTGCCCAGCCCCGCCACCACCCCC 317 | ||| ||| |||| ||| |||| |||||| || ||||| || || Sbjct 764 CGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCC 823 Query 318 GGCCTGGCTAATGACGCCAGCGCCCGACCTGCTGACACCGTTGAACGGGATTATTTCACT 377 ||| ||| ||||| ||| | |||||| || ||||||| |||||||||||||||||| Sbjct 824 GGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACC 883 Query 378 CTCCGACAG 386 ||| || || Sbjct 884 CTCAGAGAG 892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151118251814790