Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq521 87.8 1e-11 >seq521 Length=149036 Score = 87.8 bits (96), Expect = 1e-11 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 930648 CCAAATAAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGA 930707 ||||| || || | | || ||||||||||| || ||||| || || |||||| | || Sbjct 108695 CCAAAAAAGGTGCTTGTGGACTTTTCTTCACCCAACATTGCGAAGGAGATGCATGTGGGT 108636 Query 930708 CATTTGCGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGT 930767 ||| | || || ||||||||||| ||| | | || | | | ||||| ||||| | Sbjct 108635 CATCTCCGCTCCACCATTATTGGCGAAACCATTTGCCGTCTTTTTGAATTCTGTGGCTTT 108576 Query 930768 AAAGTTCATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATG 930818 | || || || |||||||| | ||||||||||| || ||||||||| Sbjct 108575 GAGGTGCACCGCATCAATCATGTGGGTGATTGGGGCACGGCGTTTGGTATG 108525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027736171377550