Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_018275.1 Length=39783 Score E Sequences producing significant alignments: (Bits) Value seq13611 201 3e-47 >seq13611 Length=919 Score = 201 bits (222), Expect = 3e-47 Identities = 212/279 (76%), Gaps = 24/279 (9%) Strand=Plus/Plus Query 37864 TTGATGTCATGAGTCGGTTAACCGCGATTATCTCCGCTCTGATTATCTGCATCATCGTCT 37923 ||||||| ||||| | | ||||||||||||||||||||| |||||||||||||||||| Sbjct 490 TTGATGT-ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCT 548 Query 37924 GTCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCGCCTACAAAGAGCAGCGCG 37983 | |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 549 GCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCG 608 Query 37984 ATAAA---GCCACA------------------TCCACAATCGCTGACATGCAGAAGCGTC 38022 | ||| |||| | | |||| |||||||||||| ||||| Sbjct 609 ACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTC 668 Query 38023 AACGTGACGTAGCAAAACTCGACGCCAGATATACAAAGGAGCTTGCTGATGCTAACGC-G 38081 | ||||| || || ||||| || | ||| || |||||| | ||||||||||| || | Sbjct 669 AGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTG 728 Query 38082 ACTATCGAAAGTCTCCGTGCTGATGTTTCTGCTGGTCGT 38120 | || || ||| |||| ||||||| | ||||||||| Sbjct 729 AAAAT-GATGCTCTGCGTGATGATGTTGCCGCTGGTCGT 766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127139453406550