Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_019442.1 Length=60523 Score E Sequences producing significant alignments: (Bits) Value seq13611 370 4e-98 >seq13611 Length=919 Score = 370 bits (410), Expect = 4e-98 Identities = 303/365 (83%), Gaps = 5/365 (1%) Strand=Plus/Plus Query 29919 GGGCTG--AATCATTACCGCGATAACGCCATCACCTACAAAGCGCAGCGCGATAAAAAAG 29976 |||||| ||||||||||| ||||||||||| ||||||||||| |||||||| ||||| | Sbjct 558 GGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAATG 617 Query 29977 TCAGTGAGCTGGAGCTGGCAAATGCAACCATTACTGATATGCAGCAGCGCCAGCGTGATG 30036 ||| || ||| ||||||| || || | |||||||| |||||| ||| |||||||||| Sbjct 618 CCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATG 677 Query 30037 TTGCTGCACTTGATGCCAGATACTCGAGGGAATTAGCCGATGCGAGAGCTGAAAATGAAA 30096 ||||||| || ||||| | |||| ||| ||| ||||| ||||| | |||||||||||| Sbjct 678 TTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGATG 737 Query 30097 CTCTTCGCGCTGACGTTGCCGCTGGTTACCGCAGCCTGCGGATCAACGCCACCTGTCCAG 30156 |||| || | ||| |||||||||||| || | ||| ||||| || |||| ||| Sbjct 738 CTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGT-CAG 796 Query 30157 GTCCCGTGCGTGAAGCCACCGGCACCGCCCGCGTGGATAATGCAACCGGCCCCCGACTGG 30216 | ||||||||||||||| | || || |||||||||||||| || ||||||||||| Sbjct 797 --TCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGG 854 Query 30217 CAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGATCACTATGCAAAAAC 30276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 855 CAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGATCACTATGCAAAAAC 914 Query 30277 AACTG 30281 ||||| Sbjct 915 AACTG 919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193484207807150