Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq594 96.9 2e-15 >seq594 Length=267672 Score = 96.9 bits (106), Expect = 2e-15 Identities = 279/427 (65%), Gaps = 2/427 (0%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 |||||| |||| || |||||||| | || ||||| ||||||| ||| || ||||| Sbjct 92952 CTCCATGAATAGGTCAGGAATCCAAAGAGCGTAAAACAAATCTCGCGCCCTATGGTCTTC 93011 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || || ||| || || | | | |||| ||| ||||| ||||| || ||||| Sbjct 93012 CTTACCCGTATTTTTCTTCAAAAGAAGAAAATTAAATATATCACCATGCCAAGGCTCTAA 93071 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||||| ||||| ||||| | || || || || |||||||| || | || || | Sbjct 93072 GTAGATGGCAAAGGCGCCTTTACGCTTGCCACCCCCCTGATCTACATAGCGCGCCGTGTT 93131 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 ||| |||| | ||| || || | ||| |||| || ||||| | | ||| | Sbjct 93132 ATTCCAAACACGTAGCATCGGTACAAGTCCGTTTGACTGGCCATTTGTCCCAGCAATGTA 93191 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 | || | | | |||| ||| | || | || || |||||||| |||| || Sbjct 93192 GCTCCCGGAACAGCGGATATTGTGCACGTGGACGCCAATGCCACCAGCTGATTTACTTAT 93251 Query 26230 AGCTGCACAAT-CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288 | | || || | || || |||||| |||| || | || || || | ||| | | Sbjct 93252 AACGGCGCATTGCTTCAA-TGTATCATAAATCCCCTCAATACTGTCCTCCCGCATGGCAA 93310 Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348 | |||||||||| | ||| | | || ||||| | ||| |||||||||||||| | Sbjct 93311 CAAGAAAACAAGAACTCATTTGAGGAAAAGGCGTTCCGGCATTGAATAATGTCGGTGTGG 93370 Query 26349 CATGAGT 26355 |||| || Sbjct 93371 CATGTGT 93377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252949039632125