Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq594 223 4e-53 >seq594 Length=267672 Score = 223 bits (246), Expect = 4e-53 Identities = 938/1454 (65%), Gaps = 54/1454 (4%) Strand=Plus/Minus Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 ||||||||||| || ||| | || || | || ||||| || || | || ||| ||| Sbjct 93182 GGGACAAATGGCCAGTCAAACGGACTTGTACCGATGCTACGTGTTTGGAATAACACGGCG 93123 Query 75563 CGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAA 75616 ||||||||| |||| |||| || ||||| || || | || ||||||| || Sbjct 93122 CGCTATGTAGATCA---GGGGGGTGGCAAGCGTAAAGGCGCCTTTGCCATCTACTTAGAG 93066 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGA 75675 || ||||||| ||||| | | || ||| || | || | | ||| | ||||| Sbjct 93065 CCTTGGCATGGTGATATATTTAATTTTCTTCTTTTGAAGAAAAATACG-GGTAAGGAAGA 93007 Query 75676 GGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | || ||||| | |||| | || |||||||| ||||| |||||| |||| || Sbjct 93006 CCATAGGGCGCGAGATTTGTTTTACGCTCTTTGGATTCCTGACCTATTCATGGAGCGTGT 92947 Query 75736 TGAGGAGGGTGGTCAA-TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC- 75793 || ||| | | ||| ||| | || | || | | ||| ||||| || ||| Sbjct 92946 -GAAGAGCGGAGGCAAGTGGACGCTGATGGACCCGCATACGGCGCCAGGACTGAGTGACT 92888 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853 || ||| ||| || ||| || | ||| ||||||| |||| | ||| | Sbjct 92887 GCTATGG-TGATGATTTTAAAAAGTTATACGAGGGGTATGAAAGGGAGAATCGAGGCGTC 92829 Query 75854 GCGACTGTACCAGCCGCCGATG--TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTG 75911 ||| || | ||| | || | ||| || || ||| |||| |||| ||| || | Sbjct 92828 AAGACCGTGCAGGCC--CAATCCCTGTGGTTTGCCATACTCGAATCGCAGATGGAAACGG 92771 Query 75912 GAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGG 75971 | || | |||||||||||||| || |||||| || || || |||||| | | Sbjct 92770 GCGTCCCTTTCATGCTTTACAAGGACGCATGTAACCGTAAATCAAATCAGAAGAATGTTG 92711 Query 75972 GAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGA 76031 || |||||| |||| || |||||||| || ||| ||||||| ||| | ||||||| Sbjct 92710 GAGTCATCAAGTGCTCGAACCTTTGCACAGAGATTATAGAGTATACATCAAGGGATGAGG 92651 Query 76032 CGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCA 76091 || || ||||| | || || || || |||||| | ||| || | |||| | | Sbjct 92650 TCGCGGTGTGCAACCTTGCCTCCATTGCACTTCCACGCTTTGTGGATAAGGAGAGAAGAA 92591 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 || || | | || |||| |||| || ||||| || |||||||| || |||| Sbjct 92590 TTTACGACCACCAGCGGCTGTATGAGGTCACGAAAATTGTCACAAAAAATCTTAATCGAG 92531 Query 76152 TCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACA 76208 | || || | || |||||| || ||| | |||| ||| || || | Sbjct 92530 TGATCGATCGTAACCATTATCCTGTACCCGAGTC-GCGCCGAAG--CAACGAGCTCAATC 92474 Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCA 76267 | || ||||| | || || ||||| | |||||| ||||| || ||| ||||| || Sbjct 92473 GTCCCATTGGAATTGGCGTGCAAGGAATGGCGGATACTTTTATCCTGATGCGGCTAC-CA 92415 Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327 || | | || || | | |||||| ||| |||||||| || || ||| Sbjct 92414 TTCACATGCCAGGAGGCGAGGACTTTGAATGAAGATATTTTTGAAACGATTTACTACGGT 92355 Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387 | |||||||||| ||| | || |||| | || |||||| | |||| || Sbjct 92354 GCTGTGGAGGCGAGCGTGGAACTCGCGGAAGTGGAGGGGCCCTATGCGCGGTTTGCAGGC 92295 Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC---AAG-CT 76443 ||||||||| ||||| ||| ||||||||| |||||| || |||||| ||| Sbjct 92294 AGTCCCGCGTCGCAAGGCCAGCTACAGTTTGATCTGTGGG-AGCAGAAACCGCGAAGTGG 92236 Query 76444 CAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 76503 | || || ||||||| | ||| | || || | | | | || | || | | || Sbjct 92235 CCGCTGGGATTGGGATGCATTGAAGAAGCGTATGATGAAAAGTGGCATGCGGA--ATTCG 92178 Query 76504 TT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAAT-CTTGGGTAATAATGAATG 76560 || || |||| |||||||| || || ||||| | || || |||||| || ||||| || Sbjct 92177 TTACTGTTGGCTCCAATGCCCACTGCATCCACTTCGCAGATACTTGGG-AACAATGAGTG 92119 Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCAT 76620 |||||| |||| || |||| |||||| || | || || ||||||||| | Sbjct 92118 CTTTGAGCCATTTACCTCAAATATCTACGTGCGCCGAGTGCTGAGTGGTGAGTTTCCTGT 92059 Query 76621 TGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG-- 76678 || |||||| |||| || | || |||| ||| ||||| ||| | | || ||| Sbjct 92058 GGTTAACAAGTACCTTGTGATGGATCTCATTAAGCGGGGTCTGTGGAACGAAGAGATGCG 91999 Query 76679 -AAGGATCTCATGG--TGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGAT 76735 || | |||| | | || ||| || | |||||||| | || ||| || Sbjct 91998 CAATCAGATCATTGCCTACAA-----TGGCTCGGTGCAAAATATTAGGGGCATTCCAAAT 91944 Query 76736 GATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATG 76795 || ||||| | || || || |||||||| || | ||| ||| |||| || ||| Sbjct 91943 GACCTCAAGGAGCTGTATCGTGTTGTGTGGGAGATTCGGCAGAAGGATCTCATCGAGATG 91884 Query 76796 GCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGT 76855 || | || ||||| |||||||| || |||||||| |||||||||| |||||| | Sbjct 91883 GCTGTGGACCGTGGCAAGTTCATTGACCAGAGTCAAAGCTTGAATCTATTTTTGGAAAAT 91824 Query 76856 CCAACGATGTCCA---AGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAA 76912 ||||| |||| |||| | || ||||| | | || ||| ||| || || || Sbjct 91823 CCAAC---TTCCAGCCAGCTGACATCCATGCACTTTTTTGCCTGGGAACGTGGCCTAAAG 91767 Query 76913 ACCGGAATGTACTA 76926 || || ||||| || Sbjct 91766 ACGGGCATGTATTA 91753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596349652245600