Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq13611 147 6e-31 >seq13611 Length=919 Score = 147 bits (162), Expect = 6e-31 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 43118 ATGAGCCGATTAACCGCAATCATCTGCGCTGTCGTTATCTGCCTGCTGGTTTCCATGGCC 43177 |||||| || | ||||| || |||| |||| | ||||||||| | | || | | || | Sbjct 497 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 556 Query 43178 TGGGCCATTAACCACTACCGCGACAACGCCATCACCTACAAAGACCAGCGCGACAAAGCC 43237 ||||| |||| || ||||| || |||||||| |||||||||| ||||||||||||| Sbjct 557 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 616 Query 43238 ACCAAAAGTCTCCGCCTGGCTAACGACACCATCAAAGACATGCAGACCCGTCAGCGTGAT 43297 ||| | || ||||| |||| | || | |||||||||| |||||||||||| Sbjct 617 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 676 Query 43298 GTCGCTGCACTGGATGCCAAATACACCGGAGAACTGGCTGATGCGAAAG 43346 || ||||| || ||||| |||||||| || | |||||||| |||| Sbjct 677 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAG 725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147506717209280