Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq16667 84.2 1e-11 seq484 84.2 1e-11 seq390 84.2 1e-11 >seq16667 Length=960 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 61723 ATGCCGGATGCCCACTCGGGCAAGGGATCTGCGGTCGGCACCGTCATCCCCACCAAGGGC 61782 |||||||||| ||| ||||| | || | | || || || || ||||| || | | || Sbjct 543 ATGCCGGATGTACACACGGGCCATGGCGCCACCGTAGGAACTGTGATCCCGACGACGCGC 484 Query 61783 GCTGTCATTCCGGCCGCTGTTGGGGTGGACATCGGCTGCGGCATGATTGCCGTCAAGAC 61841 || | |||||||| ||||||||| ||||||||||| |||||||| || || ||||| Sbjct 483 GCGCTGATTCCGGCGAGTGTTGGGGTAGACATCGGCTGTGGCATGATCGCGGTGAAGAC 425 >seq484 Length=122626 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 61723 ATGCCGGATGCCCACTCGGGCAAGGGATCTGCGGTCGGCACCGTCATCCCCACCAAGGGC 61782 |||||||||| ||| ||||| | || | | || || || || ||||| || | | || Sbjct 63181 ATGCCGGATGTACACACGGGCCATGGCGCCACCGTAGGAACTGTGATCCCGACGACGCGC 63240 Query 61783 GCTGTCATTCCGGCCGCTGTTGGGGTGGACATCGGCTGCGGCATGATTGCCGTCAAGAC 61841 || | |||||||| ||||||||| ||||||||||| |||||||| || || ||||| Sbjct 63241 GCGCTGATTCCGGCGAGTGTTGGGGTAGACATCGGCTGTGGCATGATCGCGGTGAAGAC 63299 >seq390 Length=69859 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 61723 ATGCCGGATGCCCACTCGGGCAAGGGATCTGCGGTCGGCACCGTCATCCCCACCAAGGGC 61782 |||||||||| ||| ||||| | || | | || || || || ||||| || | | || Sbjct 11727 ATGCCGGATGTACACACGGGCCATGGCGCCACCGTAGGAACTGTGATCCCGACAACGCGC 11786 Query 61783 GCTGTCATTCCGGCCGCTGTTGGGGTGGACATCGGCTGCGGCATGATTGCCGTCAAGAC 61841 || | |||||||| ||||||||| ||||||||||| |||||||| || || ||||| Sbjct 11787 GCGCTGATTCCGGCGAGTGTTGGGGTAGACATCGGCTGTGGCATGATCGCGGTGAAGAC 11845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258838121920620