Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq13611 500 2e-137 >seq13611 Length=919 Score = 500 bits (554), Expect = 2e-137 Identities = 374/437 (86%), Gaps = 6/437 (1%) Strand=Plus/Plus Query 37829 CAGCGTAAAGCTTTCTTGGATATGGTTGCATGGTCAGAAGGAACGGATAACGGGCGACAA 37888 || ||||| || || | |||||| | || ||||| || ||||| |||||||| || || Sbjct 42 CAACGTAAGGCGTTTCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACGGACGTCAG 101 Query 37889 CCGACACGTAACCACGGTTATGATGTCATTGTCGGTGGTGAACTGTTTACTGATTACTCC 37948 || | || || |||||||| |||||||| || || || || ||||||||||||||| Sbjct 102 AAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTGATTACTCC 161 Query 37949 GATCATCCTCGCAAACTTGTCACGCTAAACCCGAAACTCAAATCAACAGCAGCCGGACGT 38008 ||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 162 GATCACCCTCGCAAACTTGTCACGCTAAACCCAAAACTCAAATCAACAGGCGCCGGACGC 221 Query 38009 TACCAGCTTCTTTCCCGTTGGTGGGATGCCTACCGCAAGCAGCTAGGGCTGAAAGACTTC 38068 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 222 TACCAGCTTCTTTCCCGTTGGTGGGATGCCTACCGCAAGCAGCTTGGCCTGAAAGACTTC 281 Query 38069 TCTCCCAGAAGCCAGGACTCCGTGGCATTACAGCAGATTAAAGAGCGTGGCGCTTTACCG 38128 ||||| | ||| |||||| | |||||||| ||||||||||| ||||||||||||||||| Sbjct 282 TCTCCGAAAAGTCAGGACGCTGTGGCATTGCAGCAGATTAAGGAGCGTGGCGCTTTACCT 341 Query 38129 ATGATTGATCGCGGTGATATCCGTCAGGCAATCGACCGTTGCAGCAATATCTGGGCTTCA 38188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 342 ATGATTGATCGTGGTGATATCCGTCAGGCAATCGACCGTTGCAGCAATATCTGGGCTTCA 401 Query 38189 CTGCCGGGCGCTGGTTATGGTCAGTATGAACATAAAATCGGTGA---CCTGATTGCCAGG 38245 ||||||||||||||||||||||||| || ||||| | ||| ||||||||| | Sbjct 402 CTGCCGGGCGCTGGTTATGGTCAGTTCGAGCATAA---GGCTGACAGCCTGATTGCAAAA 458 Query 38246 TTTAAAGAGGCTGGTGG 38262 || ||||| || || || Sbjct 459 TTCAAAGAAGCGGGCGG 475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132551956996030