Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq13611 488 1e-133 >seq13611 Length=919 Score = 488 bits (540), Expect = 1e-133 Identities = 345/395 (87%), Gaps = 0/395 (0%) Strand=Plus/Plus Query 38064 CAGCGTATAGCTTTCCTCGATATGGTGGCATGGTCAGAAGGAACGGATAACGGGCGACAA 38123 || |||| || || ||||||||| |||| ||||| || ||||| |||||||| || || Sbjct 42 CAACGTAAGGCGTTTCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACGGACGTCAG 101 Query 38124 CCGACACGTAACCACGGTTATGATGTTATTGTTGGCGGCGAACTGTTTACTGATTACTCT 38183 || | || || |||||||| || ||||| ||||| || || |||||||||||||| Sbjct 102 AAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTGATTACTCC 161 Query 38184 GATCACCCTCGCAAACTTGTCACGCTAAACCCAAAACTCAAATCAACAGCCGCCGGACGT 38243 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 162 GATCACCCTCGCAAACTTGTCACGCTAAACCCAAAACTCAAATCAACAGGCGCCGGACGC 221 Query 38244 TACCAGCTTCTTTCCCGTTGGTGGGATGCCTATCGCAAGCAGCTTGGCCTGAAAGACTTC 38303 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 222 TACCAGCTTCTTTCCCGTTGGTGGGATGCCTACCGCAAGCAGCTTGGCCTGAAAGACTTC 281 Query 38304 TCTCCGAAAAGCCAGGACGCTGTGGCATTGCAGCAGATTAAAGAGCGTGGCGCTTTACCG 38363 ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 282 TCTCCGAAAAGTCAGGACGCTGTGGCATTGCAGCAGATTAAGGAGCGTGGCGCTTTACCT 341 Query 38364 ATGATTGATCGCGGCGATATTCGTCAGGCTATCGATCGTTGCAGCAATATCTGGGCGTCG 38423 ||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||| || Sbjct 342 ATGATTGATCGTGGTGATATCCGTCAGGCAATCGACCGTTGCAGCAATATCTGGGCTTCA 401 Query 38424 TTACCTGGTGCAGGTTACGGTCAGTATGAACATAA 38458 | || || || ||||| ||||||| || ||||| Sbjct 402 CTGCCGGGCGCTGGTTATGGTCAGTTCGAGCATAA 436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127059481426800