Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq594 123 3e-23 >seq594 Length=267672 Score = 123 bits (136), Expect = 3e-23 Identities = 290/438 (66%), Gaps = 0/438 (0%) Strand=Plus/Plus Query 69591 CTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCT 69650 ||| || || | ||| ||||| || |||||||||||||| ||| | ||||| | || Sbjct 92943 CTTCACACGCTCCATGAATAGGTCAGGAATCCAAAGAGCGTAAAACAAATCTCGCGCCCT 93002 Query 69651 ATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCA 69710 || ||||| || || |||||||| || | | ||||| | | |||||| |||||| Sbjct 93003 ATGGTCTTCCTTACCCGTATTTTTCTTCAAAAGAAGAAAATTAAATATATCACCATGCCA 93062 Query 69711 TGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCT 69770 || |||| || || || | | | || || || || |||||||||| || | Sbjct 93063 AGGCTCTAAGTAGATGGCAAAGGCGCCTTTACGCTTGCCACCCCCCTGATCTACATAGCG 93122 Query 69771 GGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCC 69830 || |||||||| | || | |||||||| | || || || || | |||||||| || Sbjct 93123 CGCCGTGTTATTCCAAACACGTAGCATCGGTACAAGTCCGTTTGACTGGCCATTTGTCCC 93182 Query 69831 AGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCAT 69890 || ||| || || || ||| ||||| | | || || || || || Sbjct 93183 AGCAATGTAGCTCCCGGAACAGCGGATATTGTGCACGTGGACGCCAATGCCACCAGCTGA 93242 Query 69891 TTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTAT 69950 |||| || | || || | |||||||| ||||| || ||||| || || || || Sbjct 93243 TTTACTTATAACGGCGCATTGCTTCAATGTATCATAAATCCCCTCAATACTGTCCTCCCG 93302 Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 |||| || ||||||||| | ||||||| || ||||| ||||| |||||||| Sbjct 93303 CATGGCAACAAGAAAACAAGAACTCATTTGAGGAAAAGGCGTTCCGGCATTGAATAATGT 93362 Query 70011 AGGAGATGCGTGAGTGAA 70028 || | || || ||||| Sbjct 93363 CGGTGTGGCATGTGTGAA 93380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686655545311800