Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq10668 82.4 9e-11 >seq10668 Length=878 Score = 82.4 bits (90), Expect = 9e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 77986 CTGGTGGCCCCATCCGGACTTGAACCGGAAACCTACCAGTTATGAGCCGGGCGCTCTAAC 78045 ||||||| |||| | ||||| ||||| | |||| ||| |||||||||||| |||||||| Sbjct 147 CTGGTGGACCCAACAGGACTCGAACCTGTAACCGACCGGTTATGAGCCGGTTGCTCTAAC 206 Query 78046 CAATTGAGCTATAGGGCCTGAATAA 78070 | |||||||||| || ||| || || Sbjct 207 C-ATTGAGCTATGGGTCCTTAAAAA 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568120063980600