Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq13611 333 7e-87 >seq13611 Length=919 Score = 333 bits (368), Expect = 7e-87 Identities = 228/256 (89%), Gaps = 1/256 (0%) Strand=Plus/Plus Query 38885 TTGATGTCATGAGTCGGTTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCT 38944 ||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct 490 TTGATGT-ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCT 548 Query 38945 GTCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGAGCAGCGCG 39004 | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 549 GCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCG 608 Query 39005 ATAAAAAAGTCAGTGAACTGAAGCAGGCGACCGCCACCATTACTGACATGCAGCAGCGCC 39064 | ||||| | ||| |||||||||| ||||| ||| | ||||||||||||||| ||| | Sbjct 609 ACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTC 668 Query 39065 AGCGTGATGCTGATGCACTTGATGCTAAATACACGAAGGAGTTAGCTGATGCGAAAGCTG 39124 ||||||||| || ||| || ||||| |||||||||||||||||||||||||| ||||||| Sbjct 669 AGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTG 728 Query 39125 AAAATGATGCTCTTCG 39140 ||||||||||||| || Sbjct 729 AAAATGATGCTCTGCG 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132113710547000