Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq590 116 3e-21 seq614 109 4e-19 >seq590 Length=263001 Score = 116 bits (128), Expect = 3e-21 Identities = 163/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 29650 CGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGG 29709 ||| || ||||| | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 236156 CGGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGG 236097 Query 29710 TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAA 29769 ||||| || | | || || | | || | ||| | |||| ||| ||||| || Sbjct 236096 CCGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAA 236037 Query 29770 GGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTC 29829 || || || || |||||||| | ||| | |||||||||| ||| || || || || | Sbjct 236036 CGGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCATT 235977 Query 29830 GCTCACGTAAAACTGACACATGGCA--TGGCACGGAGGAAGGGCCAT 29874 ||||||||||||||| | ||| |||||||| || |||||||| Sbjct 235976 GCTCACGTAAAACTGTGCGA--GCAGGTGGCACGGTGGTAGGGCCAT 235932 >seq614 Length=348591 Score = 109 bits (120), Expect = 4e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 29650 CGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGG 29709 ||| || ||||| | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 130232 CGGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGG 130291 Query 29710 TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAA 29769 ||||| || | | || || | | || | ||| | |||| ||| ||||| || Sbjct 130292 CCGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAA 130351 Query 29770 GGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTC 29829 || || || || |||||||| | ||| | |||||||||| ||| || || || || | Sbjct 130352 TGGGACGCCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGAAAGTTCCCCATT 130411 Query 29830 GCTCACGTAAAACTG 29844 ||||||||||||||| Sbjct 130412 GCTCACGTAAAACTG 130426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406017196387570