Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20[genbank_20GCA_5F000209065.1_202005-08-02] 29,495 sequences; 89,937,456 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq13611 127 6e-25 >seq13611 Length=919 Score = 127 bits (140), Expect = 6e-25 Identities = 190/269 (71%), Gaps = 3/269 (1%) Strand=Plus/Plus Query 8143 GGCGTTTCTGGATATGCTGGCGTACAGCGAAGGCACGGATAACGGGCGGCAGAAAACCAA 8202 ||||||||| ||||||||||||| || || || |||||||| || |||||||||| Sbjct 50 GGCGTTTCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACGGACGTCAGAAAACCAG 109 Query 8203 TAACCATGGCTATGATGTGATTGTTGGTGGCTCGTTATTTACTGACTACTCCGACCACCC 8262 || ||||| ||||| || ||||| || || | |||||||||| |||||||| ||||| Sbjct 110 AAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTGATTACTCCGATCACCC 169 Query 8263 GCGCAAGCTGATTAGCCTGCCGAAGCTGGGAATCAAATCCACTGCCGCAGGGCGCTATCA 8322 ||||| | || | || || | | ||||||| || | ||| || ||||| || Sbjct 170 TCGCAAAC---TTGTCACGCTAAACCCAAAACTCAAATCAACAGGCGCCGGACGCTACCA 226 Query 8323 GGTGCTGGCTAAGTTTTATGATGCATACAAAAAGCAACTGCGCCTGCCAGACTTCTCTCC 8382 | | || | | | ||||| ||| ||||| || ||||| |||||||||||| Sbjct 227 GCTTCTTTCCCGTTGGTGGGATGCCTACCGCAAGCAGCTTGGCCTGAAAGACTTCTCTCC 286 Query 8383 CGCATCGCAGGACGCCATTGCAATGCAGC 8411 | |||||||| | ||| |||||| Sbjct 287 GAAAAGTCAGGACGCTGTGGCATTGCAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152029932383940