Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq764 113 6e-20 >seq764 Length=631131 Score = 113 bits (124), Expect = 6e-20 Identities = 293/447 (66%), Gaps = 0/447 (0%) Strand=Plus/Minus Query 66032 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 66091 ||||| || ||||| || | |||||| |||| ||| || || |||||||||||||| Sbjct 146322 CATCAGCGTCCACTTGCCTCCGCTCTTCACACGTTCCATGAATAGGTCAGGAATCCAAAG 146263 Query 66092 AGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 66151 ||| ||| ||||||| | ||||| || || || || ||||| || || | | || Sbjct 146262 AGCGTAAAACAAATCTCGTGCCCTATGGTCTTCCTTACCCGTATTTTTCTTCAAAAGAAG 146203 Query 66152 GAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 66211 || | |||||| |||||| || || ||||| ||||| | | || || || Sbjct 146202 AAAATTAAATATATCACCATGCCAAGGCTCTAAGTAAATGGCAAAGGCGCCTTTACGCTT 146143 Query 66212 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 66271 || || ||||||| || | ||| |||||||| |||| | | ||| || | || Sbjct 146142 TCCACCCCCTTGATCTACATAGCGAGCCGTGTTATTCCAAACACGTAGCATCGGTACAAG 146083 Query 66272 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT 66331 || || || ||||| ||||| | || ||||| || || ||||| | Sbjct 146082 TCCGTTTGACTGGCCATTTGTCCCAGCAATGTAGCTCCCGGAACAGCGGATATTGTGCAC 146023 Query 66332 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 66391 | || || || || || |||| || | |||||| | || || |||||||| Sbjct 146022 GTGGACGCCAATGCCACCAGCTGATTTACTTATAACGGCGCATTGCTTCAATGTATCATA 145963 Query 66392 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 66451 || ||||| ||||| || ||| |||| || |||||||| | |||||| || Sbjct 145962 AATCCCCTCAATACTGTCCTCCCGCATGGCAACAAGAAAACAAGAACTCATTTGAGGAAA 145903 Query 66452 ACTAGTTCCCGCATTAAATAAGGTAGG 66478 | ||||| ||||| ||||| || || Sbjct 145902 AGGTGTTCCGGCATTGAATAATGTCGG 145876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164326025200