Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq774 138 1e-27 >seq774 Length=330331 Score = 138 bits (152), Expect = 1e-27 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || || ||||| ||| |||| ||||| |||||||| | ||||||||| || |||||||| Sbjct 147362 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGGC 147421 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 ||| ||||| | | ||||| || |||| |||||||||| ||| ||||| ||| Sbjct 147422 CGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAC 147481 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 ||||| || ||||||||||| || | |||||| ||| ||| ||||| ||||| Sbjct 147482 GGGACACCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCATTG 147541 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCC 21153 |||||||||||| | | ||| || || || || ||||||| Sbjct 147542 CTCACGTAAAACTGTGCGAGCAGGTGGCACGGTGGTAGGGCCATCC 147587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427770630074400