Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq774 84.2 1e-11 >seq774 Length=330331 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 25427 CGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGG 25486 ||| || ||||||| ||| ||||||||||| || || ||||| || ||||||||||| Sbjct 147361 CGGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGG 147420 Query 25487 TTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAA 25546 ||||| || | | || || | | || | ||| |||| ||| ||||| || Sbjct 147421 CCGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAA 147480 Query 25547 GGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGT 25606 || || || | ||||||| | | || | |||||||||| || || || || | | Sbjct 147481 CGGGACACCAAGGCCCATGT-CACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCAT 147539 Query 25607 CGCTCACGTAAAACTG 25622 ||||||||||||||| Sbjct 147540 TGCTCACGTAAAACTG 147555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133330210190