Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq739 93.3 3e-13 >seq739 Length=1542890 Score = 93.3 bits (102), Expect = 3e-13 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 930648 CCAAATAAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGA 930707 ||||| || || | | || ||||||||||| || ||||| || || |||||| | || Sbjct 1504450 CCAAAAAAGGTGCTTGTGGACTTTTCTTCACCCAACATTGCGAAGGAGATGCATGTGGGC 1504391 Query 930708 CATTTGCGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGT 930767 ||| | || || ||||||||||| ||| | | || | | | ||||| ||||| | Sbjct 1504390 CATCTCCGCTCCACCATTATTGGCGAAACCATTTGCCGTCTTTTTGAATTCTGTGGCTTT 1504331 Query 930768 AAAGTTCATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATG 930818 | || || || ||||||||| | ||||||||||| || ||||||||| Sbjct 1504330 GAGGTGCACCGCGTCAATCATGTGGGTGATTGGGGCACGGCGTTTGGTATG 1504280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029241528954700