Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq663 84.2 1e-11 seq352 84.2 1e-11 >seq663 Length=452067 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 61723 ATGCCGGATGCCCACTCGGGCAAGGGATCTGCGGTCGGCACCGTCATCCCCACCAAGGGC 61782 |||||||||| ||| ||||| | || | | || || || || ||||| || | | || Sbjct 384603 ATGCCGGATGTACACACGGGCCATGGCGCCACCGTAGGAACTGTGATCCCGACGACGCGC 384662 Query 61783 GCTGTCATTCCGGCCGCTGTTGGGGTGGACATCGGCTGCGGCATGATTGCCGTCAAGAC 61841 || | |||||||| ||||||||| ||||||||||| |||||||| || || ||||| Sbjct 384663 GCGCTGATTCCGGCGAGTGTTGGGGTAGACATCGGCTGTGGCATGATCGCGGTGAAGAC 384721 >seq352 Length=16149 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 61723 ATGCCGGATGCCCACTCGGGCAAGGGATCTGCGGTCGGCACCGTCATCCCCACCAAGGGC 61782 |||||||||| ||| ||||| | || | | || || || || ||||| || | | || Sbjct 14759 ATGCCGGATGTACACACGGGCCATGGCGCCACCGTAGGAACTGTGATCCCGACGACGCGC 14818 Query 61783 GCTGTCATTCCGGCCGCTGTTGGGGTGGACATCGGCTGCGGCATGATTGCCGTCAAGAC 61841 || | |||||||| ||||||||| ||||||||||| |||||||| || || ||||| Sbjct 14819 GCGCTGATTCCGGCGAGTGTTGGGGTAGACATCGGCTGTGGCATGATCGCGGTGAAGAC 14877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258927949604280