Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq253 96.9 8e-15 >seq253 Length=51549 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920 ||||| || ||||| || |||||||| |||||||| || | |||||||| | || Sbjct 30123 CTTGTTGCCTTTGCGGCGGTGGAAGGTATTTTCTTTTCCGGCTCCTTCTGTGCGCTGTTC 30064 Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980 ||||| ||||||||||| ||||||| || || | || ||| || |||||||| | Sbjct 30063 TGGCTAAAGAAGCGTGGTCTGATGCCCGGGCTGACGTTCAGTAATGAACTCATCTCGCGT 30004 Query 131981 GATGAAGCATTGCATACTGAATTTGC 132006 ||||||| ||||| || || ||||| Sbjct 30003 GATGAAGGCTTGCACACGGACTTTGC 29978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186797137779830