Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq764 123 3e-23 >seq764 Length=631131 Score = 123 bits (136), Expect = 3e-23 Identities = 290/438 (66%), Gaps = 0/438 (0%) Strand=Plus/Minus Query 69591 CTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCT 69650 ||| || |||| ||| ||||| || |||||||||||||| ||| | ||||| | || Sbjct 146298 CTTCACACGTTCCATGAATAGGTCAGGAATCCAAAGAGCGTAAAACAAATCTCGTGCCCT 146239 Query 69651 ATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCA 69710 || ||||| || || |||||||| || | | ||||| | | |||||| |||||| Sbjct 146238 ATGGTCTTCCTTACCCGTATTTTTCTTCAAAAGAAGAAAATTAAATATATCACCATGCCA 146179 Query 69711 TGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCT 69770 || |||| || || || | | | || || || || || ||||||| || | Sbjct 146178 AGGCTCTAAGTAAATGGCAAAGGCGCCTTTACGCTTTCCACCCCCTTGATCTACATAGCG 146119 Query 69771 GGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCC 69830 || |||||||| | || | |||||||| | || || || || | |||||||| || Sbjct 146118 AGCCGTGTTATTCCAAACACGTAGCATCGGTACAAGTCCGTTTGACTGGCCATTTGTCCC 146059 Query 69831 AGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCAT 69890 || ||| || || || ||| ||||| | | || || || || || Sbjct 146058 AGCAATGTAGCTCCCGGAACAGCGGATATTGTGCACGTGGACGCCAATGCCACCAGCTGA 145999 Query 69891 TTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTAT 69950 |||| || | || || | |||||||| ||||| || ||||| || || || || Sbjct 145998 TTTACTTATAACGGCGCATTGCTTCAATGTATCATAAATCCCCTCAATACTGTCCTCCCG 145939 Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 |||| || ||||||||| | ||||||| || ||||| ||||| |||||||| Sbjct 145938 CATGGCAACAAGAAAACAAGAACTCATTTGAGGAAAAGGTGTTCCGGCATTGAATAATGT 145879 Query 70011 AGGAGATGCGTGAGTGAA 70028 || | || || ||||| Sbjct 145878 CGGTGTGGCATGTGTGAA 145861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686899956049200