Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq774 116 3e-21 >seq774 Length=330331 Score = 116 bits (128), Expect = 3e-21 Identities = 163/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 29650 CGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGG 29709 ||| || ||||| | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 147361 CGGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGGGTGTGCACCAACTCTCCCGG 147420 Query 29710 TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAA 29769 ||||| || | | || || | | || | ||| | |||| ||| ||||| || Sbjct 147421 CCGCAGCCCCGTCGCCTTTGCGATGAGGATGGTCAAGAGGGCGTAGGAGGCAATGTTGAA 147480 Query 29770 GGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTC 29829 || || || || |||||||| | ||| | |||||||||| ||| || || || || | Sbjct 147481 CGGGACACCAAGGCCCATGTCACATGAGCGCTGGTAGAGCATGCAAGACAGTTCCCCATT 147540 Query 29830 GCTCACGTAAAACTGACACATGGCA--TGGCACGGAGGAAGGGCCAT 29874 ||||||||||||||| | ||| |||||||| || |||||||| Sbjct 147541 GCTCACGTAAAACTGTGCGA--GCAGGTGGCACGGTGGTAGGGCCAT 147585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406158101382580