Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20cruzi_20[genbank_20GCA_5F002219105.1_202017- 07-14] 1,030 sequences; 50,993,492 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq764 150 2e-31 >seq764 Length=631131 Score = 150 bits (166), Expect = 2e-31 Identities = 296/438 (68%), Gaps = 0/438 (0%) Strand=Plus/Minus Query 77999 CTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCT 78058 ||| || |||| ||| || || ||||| ||||| ||||| ||| | |||||| | || Sbjct 146298 CTTCACACGTTCCATGAATAGGTCAGGAATCCAAAGAGCGTAAAACAAATCTCGTGCCCT 146239 Query 78059 ATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCA 78118 ||| ||||| || || ||||| || || | | ||||| | | |||||| |||||| Sbjct 146238 ATGGTCTTCCTTACCCGTATTTTTCTTCAAAAGAAGAAAATTAAATATATCACCATGCCA 146179 Query 78119 TGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCT 78178 || |||| || || || | | || || || ||| || ||||||| ||| | Sbjct 146178 AGGCTCTAAGTAAATGGCAAAGGCGCCTTTACGCTTTCCACCCCCTTGATCTACATAGCG 146119 Query 78179 GGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCC 78238 || |||||||| |||| | | ||| || | || ||||| || |||||||| || Sbjct 146118 AGCCGTGTTATTCCAAACACGTAGCATCGGTACAAGTCCGTTTGACTGGCCATTTGTCCC 146059 Query 78239 AGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCAT 78298 || ||| || || || ||| ||||| | | | || || || || || Sbjct 146058 AGCAATGTAGCTCCCGGAACAGCGGATATTGTGCACGTGGACGCCAATGCCACCAGCTGA 145999 Query 78299 CTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCAT 78358 ||| ||| | ||||| | ||||||||||| || || ||||| |||||||| ||| Sbjct 145998 TTTACTTATAACGGCGCATTGCTTCAATGTATCATAAATCCCCTCAATACTGTCCTCCCG 145939 Query 78359 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGT 78418 |||| || ||||||||| | ||||||| || | ||||| ||||| |||||||| Sbjct 145938 CATGGCAACAAGAAAACAAGAACTCATTTGAGGAAAAGGTGTTCCGGCATTGAATAATGT 145879 Query 78419 CGGAGATGCATGCGTAAA 78436 ||| | ||||| || || Sbjct 145878 CGGTGTGGCATGTGTGAA 145861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694659856139200