Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq11292 118 1e-21 >seq11292 Length=3062 Score = 118 bits (130), Expect = 1e-21 Identities = 118/151 (78%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 16500 TTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTA 16559 |||| || |||| |||||| ||||| ||||| || || |||||||| || |||||| || Sbjct 1369 TTTCCGAATGTACGTTCTCAATGGCAATCTGGAACCCGTAGAAGCAACGCACCTCCGGTA 1428 Query 16560 TTTGTACTTCCACGTAA--AATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617 |||||||||| || | || || | |||||||||||| ||| || || |||||||| Sbjct 1429 CTTGTACTTCC--GTCATGAACCGCTGCGCCAGGTTCTCCAGCACAATTCCATCACTTGC 1486 Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAA 16648 |||||| ||||||| | |||||| || ||| Sbjct 1487 AGCAAAGAACGCCAGCACGTGCTTGATAAAA 1517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511266383887280