Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1649 116 4e-21 >seq1649 Length=2817 Score = 116 bits (128), Expect = 4e-21 Identities = 326/491 (66%), Gaps = 22/491 (4%) Strand=Plus/Minus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 ||||| ||||| ||| ||| ||||| ||||| || || ||| | || || || ||| Sbjct 2325 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGAGTGTGCACCAACTCTCCCGGC 2266 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 || ||||| | |||| | ||||| |||| |||| ||| |||||||| Sbjct 2265 CGCAGCCCCGTCGCCTTTGCGATGAGAATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAC 2206 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 || || || || |||||||| | ||||||||||||| | ||| || || ||||| Sbjct 2205 GGGACGCCAAGGCCCATGTCACATGAGCGCTGGTACAACATGCACGACAGTTCCCCATTG 2146 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 |||||||||||| || |||||||| || || |||||||| ||||| | Sbjct 2145 CTCACGTAGAACTGTGCGAGCAGGTGGCACGGTGGTAGGGCCATCCTGGGCAAAGCGCTT 2086 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGC--TC-TCGGGGTTCCTCTTGA---TCTCC 145980 || ||||| || || || |||| ||| || || || || || |||||| | || Sbjct 2085 GGATTCCATGCCGT---GAAGAGCATCCGGCGATCGTCAGGATTTGTCTTGAGCGTTTCA 2029 Query 145981 CCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTG--TCTTGGAGTCCA 146038 | || || | ||| || ||||| ||||| || || | | || ||| || Sbjct 2028 ACAAT--TGT-CTTGATTTGATCCACCCCCTGTCCGTCATAGTTGGCATCATGGTGT--G 1974 Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCT 146098 ||| |||| || ||||| | |||||| || |||||||| || || |||||| || Sbjct 1973 TGTAGTCGGCGCCAAAGTGACGCCACTGAAAGCCGTAGACAGGACCGAGGTCC---ATCT 1917 Query 146099 CCCTGTGCCCC---AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 || || | || || || | | | || || | ||||| |||||| ||||||| | Sbjct 1916 CCTCGTACTCCGTGAGGCCACGACTGTCAAGAAACGCACGGGAGCCGTTGTCGTCCCATA 1857 Query 146156 TCTTGACGCCC 146166 | | ||||||| Sbjct 1856 TGTGGACGCCC 1846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589906017022160