Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1649 100 6e-16 >seq1649 Length=2817 Score = 100 bits (110), Expect = 6e-16 Identities = 255/379 (67%), Gaps = 8/379 (2%) Strand=Plus/Plus Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATG-ATACCTGTTCTTC 35463 || || || ||||| || || |||||||| ||||| || || || | ||| | | | Sbjct 1928 GGTCCTGTCTACGGCTTTCAGTGGCGTCACTTTGGCGCCGACTACACACACCA-TGATGC 1986 Query 35464 CGATTATACTGGAAAGGGTATTGATCAATTG--GCCAATATACTAAAGACCCTGAGAGA- 35520 | | ||| ||| |||| | |||||| | | |||| | | || || || | ||| Sbjct 1987 CAACTATGACGGACAGGGGGTGGATCAAATCAAGACAAT-TGTTGAA-ACGCTCA-AGAC 2043 Query 35521 AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTAT 35580 |||||| || ||| | ||||| | | |||||||||||||| | | | | | | || Sbjct 2044 AAATCCTGACGATCGCCGGATGCTCTTCACGGCATGGAATCCAAGCGCTTTGCCCAGGAT 2103 Query 35581 GGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTG 35640 ||| || || || |||||| || || || || || ||| ||||| ||| ||||||| Sbjct 2104 GGCCCTACCACCGTGCCACCTGCTCGCACAGTTCTACGTGAGCAATGGGGAACTGTCGTG 2163 Query 35641 CCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATA 35700 | |||||| ||||| | || | || | ||||| || ||||| ||||| || || Sbjct 2164 CATGTTGTACCAGCGCTCATGTGACATGGGCCTTGGCGTCCCGTTCAACATTGCCTCCTA 2223 Query 35701 CTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCT 35760 | | || |||| ||| || || | | ||| || ||||||||||| | | Sbjct 2224 CGCCCTCTTGACCATTCTCATCGCAAAGGCGACGGGGCTGCGGCCGGGAGAGTTGGTGCA 2283 Query 35761 CACTCTTGGTGACGCACAC 35779 ||||||||||||||| ||| Sbjct 2284 CACTCTTGGTGACGCTCAC 2302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989290429392070