Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq11306 113 1e-19 >seq11306 Length=946 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | |||||| || || || || ||| Sbjct 532 GTGGACTCCTTCTGGATGTTGTAGTCTGCGAGCGTGCGACCGTCCTCCAGCTGCTTGCCA 591 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || || || || ||||| ||||| || || Sbjct 592 GCGAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC 651 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||||||||||| || ||||| || | || ||||| || || ||||| Sbjct 652 ACGTTCTCAATGGTATCGCTAGACTCCACCTCGAGCGCGATCGTCTTGCCCGTCAGTGTC 711 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 712 TTCACAAAAATTTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151056825431032