Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5537 84.2 2e-11 >seq5537 Length=6528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 186/274 (68%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 131863 CACGGTGAATTGAATTGTATTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTT 131922 ||||||||||| |||| || |||||| || || | | ||| ||||||||||||||||| Sbjct 5897 CACGGTGAATTTGATTGCATCCGCAGCCGGTTTGCTCCGTAAGTAATACATGCCCGTCTT 5838 Query 131923 CAAGCCTTTCTCCCAAGAATAATTGTGTATGGACGATAAAATTTTGTAGCTGGGATTGGC 131982 | ||| ||||| | | || ||| || || | | || | | ||||| | Sbjct 5837 GAGGCCACGTTCCCAGGCAAAAAAGTGCATAGATGTCAGCTGGCTGGAAGTTGGATTTTC 5778 Query 131983 CACAAACAGATTGAGCGATTGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCATATT 132042 || ||||||||| | ||||||||| || ||| | || | ||| | ||||| | Sbjct 5777 CAAAAACAGATTCAAGCTTTGACTCTGGTCAATGAACTTGCCACGGTCCACAGCCAT-CT 5719 Query 132043 CAACAATA-CTTTCTGCTTAATTTCCCAAGCGGTCTTGA-AGAGCGCCTTGACGTCGTGT 132100 ||| || | | |||||| ||||||||| | | || | | | |||||| ||| | | Sbjct 5718 CAATAAGATCCTTCTGCCGAATTTCCCACAC-AACACGATACAACTCCTTGAGGTCATTT 5660 Query 132101 GGAATGTCATCGATATTCTGTACAGATCCGTTGT 132134 |||||| | | || || ||||| || || |||| Sbjct 5659 GGAATGCCCTTAATGTTTTGTACCGAGCCATTGT 5626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429814676628870