Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5043 89.7 4e-12 seq10494 87.8 1e-11 >seq5043 Length=8095 Score = 89.7 bits (98), Expect = 4e-12 Identities = 180/267 (67%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506 ||||| || ||||||| ||||| || || || | | | |||| ||| | | ||| Sbjct 1861 ACTTTGAAGGGCCAGTGCTTCATGTCGGACTGCAGATCAGGATCATCAAACTTACGGCCA 1920 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 || | || || | || || | || || || || || || ||| | || | || || Sbjct 1921 ATCATGCGCTTCACGTCGAAGACGGTGTTCGTCGGGTTCATCGCAACCTGGTTCTTCGCG 1980 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 ||||| || |||||| | || || || || || | || || || || |||||||| || Sbjct 1981 GCATCACCGATCAGACGCTCCGTGTCGGTGAACGCCACGTACGACGGCGTTGTGCGGTTG 2040 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686 || ||||| ||||||||||| || || | |||| | | ||||| || || || Sbjct 2041 CCCTGATCGTTCGCAATAATCTCGACCTGGTCATTCTTAAAGACACCAACGCATGAGTAA 2100 Query 518687 GTTGTTCCTAAATCAATACCAATAGCA 518713 || || || | |||||| || |||||| Sbjct 2101 GTCGTGCCAAGATCAATGCCGATAGCA 2127 >seq10494 Length=16611 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 870801 TTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAA 870860 |||| || | |||||| || || ||||| || || |||||| | || ||| | | || | Sbjct 1133 TTGTGGACTTTTCTTCACCCAACATTGCGAAGGAGATGCATGTGGGGCATCTTCGTTCCA 1192 Query 870861 CTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTA 870920 | |||||||| ||| | ||||| | | | ||| | ||||| || || | || | Sbjct 1193 CCATTATTGGCGAAACCATTTGCCGTCTTCTTGAATTCTGTGGGTTTGAGGTGCACCGCA 1252 Query 870921 TTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATG 870958 | |||||||||||||||||||| || |||||||||| Sbjct 1253 TCAATCATGTGGGTGATTGGGGTACGGCATTCGGTATG 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779673422250724