Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq9775 86.0 9e-12 >seq9775 Length=15480 Score = 86.0 bits (94), Expect = 9e-12 Identities = 186/271 (69%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 136645 TAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGG 136704 || ||||||||||| || | ||| || || | || | ||||| |||||| ||| Sbjct 11692 TACCCCTTCACGCAAAGAATTTGTTTAAGCGCACACACAACCTCCACAAGGTCCCCCTGA 11751 Query 136705 GCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCG 136764 ||| ||| || |||| || | ||||| ||||||||| | ||||| | |||| | | Sbjct 11752 GCCCGCATTACATCGTCAATCTTTTTGTATGCCATCGGGGTCTCGTCAAGCACGTCGGTA 11811 Query 136765 TCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGGTCGCC 136824 |||||||| |||||||| || | || ||| || ||||| || || || ||||| Sbjct 11812 TCCTTGCGACACTCCACATCCGCCGTAGCCGCCTCGTGATCCTCGAGTGTAAA--TCGCC 11869 Query 136825 TTGGCCTGGGTCCGCGAC-ATCG-TCCGGCCCGCGCCGTGCGAGCACGAGCAG-AAC-GA 136880 | | | || |||| || | || ||| || ||||| || || || || ||| || Sbjct 11870 GTTTCGTCTCACCACGACTATAGAGCCTGCCGGCACCGTGTGAACAAGAAGAGTAACTGA 11929 Query 136881 GTCCGCATTGCCCTTGCCGCGCACGATGTAG 136911 | || | ||||||| || ||||| |||||| Sbjct 11930 G--CGGACTGCCCTTTCCACGCACAATGTAG 11958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689944255072800