Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq11292 123 3e-22 >seq11292 Length=3062 Score = 123 bits (136), Expect = 3e-22 Identities = 215/313 (69%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||| || | |||||| ||||| |||||||| ||||| ||| | |||||| | |||| Sbjct 1372 CCGAATGTACGTTCTCAATGGCAATCTGGAACCCGTAGAAGCAACGCACCTCCGGTACTT 1431 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || ||| |||||||||| ||||||||||| ||| || || || || || || | Sbjct 1432 GTACTTCCGTCATGAACCGCTGCGCCAGGTTCTCCAGCACAATTCCATCACTTGCAGCAA 1491 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || ||||| |||||||||||||| | ||| | ||||| | | |||||| Sbjct 1492 AGAACGCCAGCACGTGCTTGATAAAAAACCTCTCCCCCTCGCTCATCTTTTCCCAGTCCG 1551 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 | ||| ||| | ||| | ||||| | |||||||| | ||||||| |||| Sbjct 1552 CCAAGTCACTGCTCAAGTCGATTTCCTCCACCGTCCAGATGCTGCTTTCGGCCTCCTTGT 1611 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGC 869930 || ||| ||| | | ||||| || || |||| || | |||| || || |||| Sbjct 1612 ACTTCTTCCAGATATCGTGGTATTTAATCGGAAAGATCACGTAACGGTCAGGATTCTCGC 1671 Query 869931 GCAACAGGGGTTC 869943 ||| || ||||| Sbjct 1672 GCAGAAGCGGTTC 1684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105239074329818