Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq10494 87.8 1e-11 >seq10494 Length=16611 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 637124 TTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAA 637183 |||| || | |||||| || || ||||| || || |||||| | || ||| | | || | Sbjct 1133 TTGTGGACTTTTCTTCACCCAACATTGCGAAGGAGATGCATGTGGGGCATCTTCGTTCCA 1192 Query 637184 CTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTA 637243 | |||||||| ||| | ||||| | | | ||| | ||||| || || | || | Sbjct 1193 CCATTATTGGCGAAACCATTTGCCGTCTTCTTGAATTCTGTGGGTTTGAGGTGCACCGCA 1252 Query 637244 TTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATG 637281 | |||||||||||||||||||| || |||||||||| Sbjct 1253 TCAATCATGTGGGTGATTGGGGTACGGCATTCGGTATG 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739493636448804