Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1649 149 7e-31 >seq1649 Length=2817 Score = 149 bits (164), Expect = 7e-31 Identities = 380/573 (66%), Gaps = 4/573 (1%) Strand=Plus/Minus Query 146923 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGC 146982 ||||| ||||| ||| ||| ||||| ||||| || || |||||||| || || |||||| Sbjct 2325 GGCTCGACGTGATTGCTGTACACGTGAGCGTCACCAAGAGTGTGCACCAACTCTCCCGGC 2266 Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 || || ||| | | || | | ||| | || | |||| ||| |||||||| Sbjct 2265 CGCAGCCCCGTCGCCTTTGCGATGAGAATGGTCAAGAGGGCGTAGGAGGCAATGTTGAAC 2206 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCG 147102 ||||| || ||||||||||| | || | |||||||| | |||||| || ||||| | | Sbjct 2205 GGGACGCCAAGGCCCATGTCACATGAGCGCTGGTACAACATGCACGACAGTTCCCCATTG 2146 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG 147162 |||||| ||||| || | ||||||||| || || ||||| ||||| | Sbjct 2145 CTCACGTAGAACTGTGCGAGCAGGTGGCACGGTGGTAGGGCCATCCTGGGCAAAGCGCTT 2086 Query 147163 GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGAT 147221 || ||||| |||| || | || ||| | | || || || || |||| | | ||| | Sbjct 2085 GGATTCCATGCCGTGAAGAGCATCCGGC-GATCGTCAGGATTTGTCTTGAGCGTTTCAAC 2027 Query 147222 AACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCT 147281 || | | | || ||||| ||||| || | ||||| | | || ||| Sbjct 2026 AATTGTCTTGATTTGATCCACCCCCTGTCCGTCATAGTTGGCATCATGGTGTGTGTAGTC 1967 Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 ||| |||||||| | |||||| |||||||| || || || ||||| || | Sbjct 1966 GGCGCCAAAGTGACGCCACTGAAAGCCGTAGACAGGACCGAGGTCCATCTCCTCGTACTC 1907 Query 147342 CGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400 || || ||| || | | | |||||| | |||| |||| | ||||||| ||| || | Sbjct 1906 CGTGAGGCCACGACTG-TCAAGAAACGCACGGGAGCCGTTGTCGTCCCATATGTGGACGC 1848 Query 147401 CCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCA 147460 ||||| | | || ||| | | || ||||| | ||||| || || ||||| Sbjct 1847 CCTTGTCACTTAACTTCTTGGCATATGTTTCACCCCGTAGAAACCACAGTAGTTCCTCGC 1788 Query 147461 AAACCCCCCTCCAAAAGACCCTCTTGGTGGTCA 147493 | || || | |||||| |||| ||| || |||| Sbjct 1787 ACACACCACGCCAAAAAACCCGCTTTGTTGTCA 1755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583319123985600