Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq11307 140 3e-28 seq11306 134 1e-26 seq14056 123 2e-23 >seq11307 Length=654 Score = 140 bits (154), Expect = 3e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || |||| ||||||||||| || || || Sbjct 426 CTCCTTCTGGATGTTGTAGTCTGCGAGCGTGCGACCGTCCTCCAGCTGCTTGCCAGCGAA 485 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| |||||| ||||| | Sbjct 486 GATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 545 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| || |||||||| | || |||||| || ||||||| || ||||| Sbjct 546 CTCAATGGTGTCGCTGGACTCCACCTCGAGCGCGATCGTCTTGCCCGTCAGTGTCTTCAC 605 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 606 GAAGATCTGCAT 617 >seq11306 Length=946 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || |||| ||||||||||| || || || Sbjct 537 CTCCTTCTGGATGTTGTAGTCTGCGAGCGTGCGACCGTCCTCCAGCTGCTTGCCAGCGAA 596 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| |||||| ||||| | Sbjct 597 GATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 656 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| || |||||||| | || |||||| || ||||||| || ||||| Sbjct 657 CTCAATGGTATCGCTAGACTCCACCTCGAGCGCGATCGTCTTGCCCGTCAGTGTCTTCAC 716 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 717 AAAAATTTGCAT 728 >seq14056 Length=822 Score = 123 bits (136), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | || || | || ||||||||||| || || || Sbjct 654 CTCCTTCTGGATGTTGTAGTCTGCGAGCGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 595 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| || |||||||||| |||||| ||||| | Sbjct 594 GATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 535 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||||| || |||||||| | | ||||| || ||||||| || ||||| Sbjct 534 CTCAATGGTATCGCTGGACTCCACCTCGAGTGCAATCGTCTTGCCCGTCAGTGTCTTCAC 475 Query 35725 AAATATCTGCATTCTGTGCGC 35745 || |||||||| | ||| || Sbjct 474 GAAGATCTGCATGCCGTGTGC 454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450663129062320