Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trypanosoma_20cruzi_20marinkellei_20[genbank_20GCA_5F000300495.1_202 012-10-01] 23,154 sequences; 34,226,154 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1649 96.9 3e-15 >seq1649 Length=2817 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 29668 GTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29727 ||| |||||||| || || || ||||| || ||||||||||| ||||| || | | Sbjct 2308 GTACACGTGAGCGTCACCAAGAGTGTGCACCAACTCTCCCGGCCGCAGCCCCGTCGCCTT 2249 Query 29728 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCAT 29787 || || | || | ||| | |||| ||| ||||| || || || || || ||||| Sbjct 2248 TGCGATGAGAATGGTCAAGAGGGCGTAGGAGGCAATGTTGAACGGGACGCCAAGGCCCAT 2189 Query 29788 GTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACA 29847 ||| | ||| | |||||| | | |||||| || || || | ||||||||| ||||| Sbjct 2188 GTCACATGAGCGCTGGTACAACATGCACGACAGTTCCCCATTGCTCACGTAGAACTGTGC 2129 Query 29848 CATGGCA--TGGCACGGAGGAAGGGCCAT 29874 | ||| |||||||| || |||||||| Sbjct 2128 GA--GCAGGTGGCACGGTGGTAGGGCCAT 2102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406048585060444